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2022
Daniel HD-J, Kumar S, Kannangai R, J F, Joel JN, Abraham A, Lakshmi KM, Agbandje-McKenna M, Coleman KE, Srivastava A, Srivastava A, Abraham AM.  2022.  Age-stratified adeno-associated virus serotype 3 neutralizing and total antibody prevalence in hemophilia A patients from India.. J Med Virol. 94(9):4542-4547. DOI:10.1002/jmv.27859.
Venkatesan V, Christopher ACrystal, Karuppusamy KV, Babu P, Alagiri MKumar K, Thangavel S.  2022.  CRISPR/Cas9 Gene Editing of Hematopoietic Stem and Progenitor Cells for Gene Therapy Applications.. J Vis Exp. (186) DOI:10.3791/64064.
Bagchi A, Devaraju N, Chambayil K, Rajendiran V, Venkatesan V, Sayed N, Pai AAnand, Nath A, David E, Nakamura Y, Balasubramanian P, Srivastava A, Thangavel S, Mohankumar KM, Velayudhan SR.  2022.  Erythroid lineage-specific lentiviral RNAi vectors suitable for molecular functional studies and therapeutic applications.. Sci Rep. 12(1):14033. DOI:10.1038/s41598-022-13783-0.
Devaraju N, Rajendiran V, Ravi NSam, Mohankumar KM.  2022.  Genome Engineering of Hematopoietic Stem Cells Using CRISPR/Cas9 System.. Methods Mol Biol. 2429:307-331. DOI:10.1007/978-1-0716-1979-7_20.
Ghosh S, Singh R, Vanwinkle ZMatthew, Guo H, Vemula PKumar, Goel A, Haribabu B, Jala VRao.  2022.  Microbial metabolite restricts 5-fluorouracil-resistant colonic tumor progression by sensitizing drug transporters via regulation of FOXO3-FOXM1 axis.. Theranostics. 12(12):5574-5595. DOI:10.7150/thno.70754.
Christopher ACrystal, Venkatesan V, Karuppusamy KV, Srinivasan S, Babu P, Azhagiri MKumar K, Chambayil K, Bagchi A, Rajendiran V, Ravi NSam, Kumar S, Marepally SKumar, Mohankumar KMurugesan, Srivastava A, Velayudhan SR, Thangavel S.  2022.  Preferential Expansion of Human CD34CD133CD90 Hematopoietic Stem Cells Enhances Gene-Modified Cell Frequency for Gene Therapy.. Hum Gene Ther. 33(3-4):188-201. DOI:10.1089/hum.2021.089.
Dubey VKumar, Sarkar SR, Lakshmanan V, Dalmeida R, Gulyani A, Palakodeti D.  2022.  S. mediterranea ETS-1 regulates the function of cathepsin-positive cells and the epidermal lineage landscape via basement membrane remodeling.. J Cell Sci. 135(20) DOI:10.1242/jcs.259900.
2021
Domnauer M, Zheng F, Li L, Zhang Y, Chang CE, Unruh JR, Conkright-Fincham J, McCroskey S, Florens L, Zhang Y, Seidel C, Fong B, Schilling B, Sharma R, Ramanathan A, Si K, Zhou C.  2021.  Proteome plasticity in response to persistent environmental change.. Mol Cell. 81(16):3294-3309.e12. DOI:10.1016/j.molcel.2021.06.028.
Nikhat S, Yadavalli AD, Prusty A, Narayan PK, Palakodeti D, Murre C, Pongubala JMR.  2021.  A regulatory network of microRNAs confers lineage commitment during early developmental trajectories of B and T lymphocytes.. Proc Natl Acad Sci U S A. 118(46) DOI:10.1073/pnas.2104297118.
Chakraborty P, Chattarji S, Jeanneteau F.  2021.  A salience hypothesis of stress in PTSD.. Eur J Neurosci. 54(11):8029-8051. DOI:10.1111/ejn.15526.
Saxena K, Chakraborty P, Chattarji S.  2021.  The same stress has divergent effects on social versus asocial manifestations of anxiety-like behavior over time.. Stress. 24(4):474-480. DOI:10.1080/10253890.2020.1855421.
Prabhakara C, Godbole R, Sil P, Jahnavi S, Gulzar S-E-J, van Zanten TS, Sheth D, Subhash N, Chandra A, Shivaraj A, Panikulam P, U I, Nuthakki VKumar, Puthiyapurayil TParassini, Ahmed R, Najar AHussain, Lingamallu SManoz, Das S, Mahajan B, Vemula P et al..  2021.  Strategies to target SARS-CoV-2 entry and infection using dual mechanisms of inhibition by acidification inhibitors.. PLoS Pathog. 17(7):e1009706. DOI:10.1371/journal.ppat.1009706.
2020
Thimmegowda GG, Brockmann A, Dhandapany PS, Olsson SB.  2020.  Reply to Negri et al.: Air pollution and health impacts on bees: Signs of causation.. Proc Natl Acad Sci U S A. 117(43):26578-26579. DOI:10.1073/pnas.2017972117.
Yasmin F, Colangeli R, Morena M, Filipski S, van der Stelt M, Pittman QJ, Hillard CJ, G Teskey C, McEwen BS, Hill MN, Chattarji S.  2020.  Stress-induced modulation of endocannabinoid signaling leads to delayed strengthening of synaptic connectivity in the amygdala.. Proc Natl Acad Sci U S A. 117(1):650-655. DOI:10.1073/pnas.1910322116.
2019
Guichard A, Haque T, Bobik M, Xu X-RS, Klanseck C, Kushwah RBabu Singh, Berni M, Kaduskar B, Gantz VM, Bier E.  2019.  Efficient allelic-drive in Drosophila.. Nat Commun. 10(1):1640. DOI:10.1038/s41467-019-09694-w.
Singh R, Chandrashekharappa S, Bodduluri SR, Baby BV, Hegde B, Kotla NG, Hiwale AA, Saiyed T, Patel P, Vijay-Kumar M, Langille MGI, Douglas GM, Cheng X, Rouchka EC, Waigel SJ, Dryden GW, Alatassi H, Zhang H-G, Haribabu B, Vemula PK et al..  2019.  Enhancement of the gut barrier integrity by a microbial metabolite through the Nrf2 pathway.. Nat Commun. 10(1):89. DOI:10.1038/s41467-018-07859-7.
2018
Rahman MMostafizur, Shukla A, Chattarji S.  2018.  Extinction recall of fear memories formed before stress is not affected despite higher theta activity in the amygdala.. Elife. 7 DOI:10.7554/eLife.35450.
Dzhonova D, Olariu R, Leckenby J, Dhayani A, Vemula PKumar, Prost J-C, Banz Y, Taddeo A, Rieben R.  2018.  Local release of tacrolimus from hydrogel-based drug delivery system is controlled by inflammatory enzymes in vivo and can be monitored non-invasively using in vivo imaging.. PLoS One. 13(8):e0203409. DOI:10.1371/journal.pone.0203409.
Rangiah K, Palakodeti D.  2018.  Quantification of Neurotransmitters from Intact and Regenerating Planarians Using UHPLC-MS/SRM Method.. Methods Mol Biol. 1774:555-570. DOI:10.1007/978-1-4939-7802-1_25.
Patel D, Anilkumar S, Chattarji S, Buwalda B.  2018.  Repeated social stress leads to contrasting patterns of structural plasticity in the amygdala and hippocampus.. Behav Brain Res. 347:314-324. DOI:10.1016/j.bbr.2018.03.034.
2017
Javali A, Misra A, Leonavicius K, Acharyya D, Vyas B, Sambasivan R.  2017.  Co-expression of Tbx6 and Sox2 identifies a novel transient neuromesoderm progenitor cell state.. Development. 144(24):4522-4529. DOI:10.1242/dev.153262.
Bansal D, Kulkarni J, Nadahalli K, Lakshmanan V, Krishna S, Sasidharan V, Geo J, Dilipkumar S, Pasricha R, Gulyani A, Raghavan S, Palakodeti D.  2017.  Cytoplasmic poly (A)-binding protein critically regulates epidermal maintenance and turnover in the planarian .. Development. 144(17):3066-3079. DOI:10.1242/dev.152942.
Vyas N, Dhawan J.  2017.  Exosomes: mobile platforms for targeted and synergistic signaling across cell boundaries.. Cell Mol Life Sci. 74(9):1567-1576. DOI:10.1007/s00018-016-2413-9.
Plapp BV, Savarimuthu BRaj, Ferraro DJ, Rubach JK, Brown EN, Ramaswamy S.  2017.  Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis.. Biochemistry. 56(28):3632-3646. DOI:10.1021/acs.biochem.7b00446.
Arora R, Rumman M, Venugopal N, Gala H, Dhawan J.  2017.  Mimicking Muscle Stem Cell Quiescence in Culture: Methods for Synchronization in Reversible Arrest.. Methods Mol Biol. 1556:283-302. DOI:10.1007/978-1-4939-6771-1_15.
2016
Lakshmanan V, Bansal D, Kulkarni J, Poduval D, Krishna S, Sasidharan V, Anand P, Seshasayee A, Palakodeti D.  2016.  Genome-Wide Analysis of Polyadenylation Events in Schmidtea mediterranea.. G3 (Bethesda). 6(10):3035-3048. DOI:10.1534/g3.116.031120.
Kurbet AS, Hegde S, Bhattacharjee O, Marepally S, Vemula PK, Raghavan S.  2016.  Sterile Inflammation Enhances ECM Degradation in Integrin β1 KO Embryonic Skin.. Cell Rep. 16(12):3334-3347. DOI:10.1016/j.celrep.2016.08.062.
2015
Natarajan N, Ramakrishnan P, Lakshmanan V, Palakodeti D, Rangiah K.  2015.  A quantitative metabolomics peek into planarian regeneration.. Analyst. 140(10):3445-64. DOI:10.1039/c4an02037e.
1975
Smith RJ, Bryant RG.  1975.  Metal substitutions incarbonic anhydrase: a halide ion probe study.. Biochem Biophys Res Commun. 66(4):1281-6. DOI:10.1016/0006-291x(75)90498-2.