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Subramanian SPeruvemba, Lakshmanan V, Palakodeti D, Subramanian R.  2021.  Glycomic and glycotranscriptomic profiling of mucin-type O-glycans in planarian Schmidtea mediterranea.. Glycobiology. DOI:10.1093/glycob/cwab097.
Dhar MS, Marwal R, Vs R, Ponnusamy K, Jolly B, Bhoyar RC, Sardana V, Naushin S, Rophina M, Mellan TA, Mishra S, Whittaker C, Fatihi S, Datta M, Singh P, Sharma U, Ujjainiya R, Bhatheja N, Divakar MKumar, Singh MK et al..  2021.  Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India.. Science. :eabj9932. DOI:10.1126/science.abj9932.
Lakshmanan V, Bansal D, Kulkarni J, Poduval D, Krishna S, Sasidharan V, Anand P, Seshasayee A, Palakodeti D.  2016.  Genome-Wide Analysis of Polyadenylation Events in Schmidtea mediterranea.. G3 (Bethesda). 6(10):3035-3048. DOI:10.1534/g3.116.031120.
Srinivasan R, Walvekar AS, Rashida Z, Seshasayee A, Laxman S.  2020.  Genome-scale reconstruction of Gcn4/ATF4 networks driving a growth program.. PLoS Genet. 16(12):e1009252. DOI:10.1371/journal.pgen.1009252.
Devaraju N, Rajendiran V, Ravi NSam, Mohankumar KM.  2022.  Genome Engineering of Hematopoietic Stem Cells Using CRISPR/Cas9 System.. Methods Mol Biol. 2429:307-331. DOI:10.1007/978-1-0716-1979-7_20.
Kesarwani S, Lama P, Chandra A, P Reddy P, Jijumon AS, Bodakuntla S, Rao BM, Janke C, Das R, Sirajuddin M.  2020.  Genetically encoded live-cell sensor for tyrosinated microtubules.. J Cell Biol. 219(10) DOI:10.1083/jcb.201912107.
Nandakumar M, Ishtiaq F.  2020.  Genetic drift and bottleneck do not influence diversity in Toll-like receptor genes at a small spatial scale in a Himalayan passerine.. Ecol Evol. 10(21):12246-12263. DOI:10.1002/ece3.6855.
Arif M, Nabavizadeh P, Song T, Desai D, Singh R, Bazrafshan S, Kumar M, Wang Y, Gilbert RJ, Dhandapany PS, Becker RC, Kranias EG, Sadayappan S.  2020.  Genetic, clinical, molecular, and pathogenic aspects of the South Asian-specific polymorphic MYBPC3 variant.. Biophys Rev. 12(4):1065-1084. DOI:10.1007/s12551-020-00725-1.
Badnikar K.7., Jayadevi S.N, Pahal S., Sripada S., Nayak M.M, Vemula P.K, Subrahmanyam D.N.  2020.  Generic Molding Platform for Simple, Low‐Cost Fabrication of Polymeric Microneedles. Macromolecular Materials and Engineering. 305(5)
Frederiksen HR, Holst B, Ramakrishna S, Muddashetty R, Schmid B, Freude K.  2019.  Generation of two iPSC lines with either a heterozygous V717I or a heterozygous KM670/671NL mutation in the APP gene.. Stem Cell Res. 34:101368. DOI:10.1016/j.scr.2018.101368.
Schmid B, Prehn KR, Nimsanor N, Garcia BIrene Alda, Poulsen U, Jørring I, Rasmussen MA, Clausen C, Mau-Holzmann UA, Ramakrishna S, Muddashetty R, Steeg R, Bruce K, Mackintosh P, Ebneth A, Holst B, Cabrera-Socorro A.  2019.  Generation of a set of isogenic, gene-edited iPSC lines homozygous for all main APOE variants and an APOE knock-out line.. Stem Cell Res. 34:101349. DOI:10.1016/j.scr.2018.11.010.
Giri S, Purushottam M, Viswanath B, Muddashetty RS.  2019.  Generation of a FMR1 homozygous knockout human embryonic stem cell line (WAe009-A-16) by CRISPR/Cas9 editing.. Stem Cell Res. 39:101494. DOI:10.1016/j.scr.2019.101494.
Thamodaran V, Rani S, Velayudhan SR.  2021.  Gene Editing in Human Induced Pluripotent Stem Cells Using Doxycycline-Inducible CRISPR-Cas9 System.. Methods Mol Biol. DOI:10.1007/7651_2021_348.
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Brown KS, Rao MS, Brown HL.  2019.  The Future State of Newborn Stem Cell Banking.. J Clin Med. 8(1) DOI:10.3390/jcm8010117.
D'Souza MNinochka, Ramakrishna S, Radhakrishna BK, Jhaveri V, Ravindran S, Yeramala L, Nair D, Palakodeti D, Muddashetty RS.  2022.  Function of FMRP Domains in Regulating Distinct Roles of Neuronal Protein Synthesis.. Mol Neurobiol. 59(12):7370-7392. DOI:10.1007/s12035-022-03049-1.
Basu DSain, Bhavsar R, Gulami I, Chavda S, Lingamallu SManoz, Muddashetty R, Veeranna C, Chattarji S, Thimmulappa R, Bhattacharya A, Guha A.  2022.  FMRP protects the lung from xenobiotic stress by facilitating the Integrated Stress Response.. J Cell Sci. DOI:10.1242/jcs.258652.
D'Souza MNinochka, Gowda NKumar Chan, Tiwari V, Babu ROttakandat, Anand P, Dastidar SGhosh, Singh R, James OG, Selvaraj B, Pal R, Ramesh A, Chattarji S, Chandran S, Gulyani A, Palakodeti D, Muddashetty RS.  2018.  FMRP Interacts with C/D Box snoRNA in the Nucleus and Regulates Ribosomal RNA Methylation.. iScience. 9:399-411. DOI:10.1016/j.isci.2018.11.007.
Haroon MMohamed, Vemula PKumar, Palakodeti D.  2022.  Flow Cytometry Analysis of Planarian Stem Cells Using DNA and Mitochondrial Dyes.. Bio Protoc. 12(2):e4299. DOI:10.21769/BioProtoc.4299.
Thimmegowda GG, Mullen S, Sottilare K, Sharma A, Mohanta SSoham, Brockmann A, Dhandapany PS, Olsson SB.  2020.  A field-based quantitative analysis of sublethal effects of air pollution on pollinators.. Proc Natl Acad Sci U S A. 117(34):20653-20661. DOI:10.1073/pnas.2009074117.
O. RSufi, Gandhi S, Ananya M, Chellappa D, Akash G.  2017.  Facile Synthesis of Highly Sensitive, Red‐Emitting, Fluorogenic Dye for Microviscosity and Mitochondrial Imaging in Embryonic Stem Cells. ChemistrySelect. 2:4609-4616. DOI:10.1002/slct.201700463.
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Rahman MMostafizur, Shukla A, Chattarji S.  2018.  Extinction recall of fear memories formed before stress is not affected despite higher theta activity in the amygdala.. Elife. 7 DOI:10.7554/eLife.35450.
Rangasami VK, Lohchania B, Voshavar C, Rachamalla HR, Banerjee R, Dhayani A, Thangavel S, Vemula PK, Marepally S.  2018.  Exploring membrane permeability of Tomatidine to enhance lipid mediated nucleic acid transfections. Biochimica et Biophysica Acta (BBA) - Biomembranes. :-. DOI:https://doi.org/10.1016/j.bbamem.2018.06.006.
Premageetha GThambraRaj, Vinothkumar KR, Bose S.  2024.  Exploring advances in single particle CryoEM with apoferritin: From blobs to true atomic resolution.. Int J Biochem Cell Biol. 169:106536. DOI:10.1016/j.biocel.2024.106536.
Saxena K, Webster J, Hallas-Potts A, Mackenzie R, Spooner PA, Thomson D, Kind P, Chatterji S, Morris RGM.  2018.  Experiential contributions to social dominance in a rat model of fragile-X syndrome.. Proc Biol Sci. 285(1880) DOI:10.1098/rspb.2018.0294.
Vyas N, Dhawan J.  2017.  Exosomes: mobile platforms for targeted and synergistic signaling across cell boundaries.. Cell Mol Life Sci. 74(9):1567-1576. DOI:10.1007/s00018-016-2413-9.
Ganesh S, P HAhmed, Nadella RK, More RP, Seshadri M, Viswanath B, Rao M, Jain S, Mukherjee O.  2019.  Exome sequencing in families with severe mental illness identifies novel and rare variants in genes implicated in Mendelian neuropsychiatric syndromes.. Psychiatry Clin Neurosci. 73(1):11-19. DOI:10.1111/pcn.12788.
Bagchi A, Devaraju N, Chambayil K, Rajendiran V, Venkatesan V, Sayed N, Pai AAnand, Nath A, David E, Nakamura Y, Balasubramanian P, Srivastava A, Thangavel S, Mohankumar KM, Velayudhan SR.  2022.  Erythroid lineage-specific lentiviral RNAi vectors suitable for molecular functional studies and therapeutic applications.. Sci Rep. 12(1):14033. DOI:10.1038/s41598-022-13783-0.
Singh R, Chandrashekharappa S, Bodduluri SR, Baby BV, Hegde B, Kotla NG, Hiwale AA, Saiyed T, Patel P, Vijay-Kumar M, Langille MGI, Douglas GM, Cheng X, Rouchka EC, Waigel SJ, Dryden GW, Alatassi H, Zhang H-G, Haribabu B, Vemula PK et al..  2019.  Enhancement of the gut barrier integrity by a microbial metabolite through the Nrf2 pathway.. Nat Commun. 10(1):89. DOI:10.1038/s41467-018-07859-7.
Chakravarthy A, Nandakumar A, George G, Ranganathan S, Umashankar S, Shettigar N, Palakodeti D, Gulyani A, Ramesh A.  2021.  Engineered RNA biosensors enable ultrasensitive SARS-CoV-2 detection in a simple color and luminescence assay.. Life Sci Alliance. 4(12) DOI:10.26508/lsa.202101213.
Ramakrishna S, Muddashetty RS.  2019.  Emerging Role of microRNAs in Dementia.. J Mol Biol. DOI:10.1016/j.jmb.2019.01.046.

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