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Journal Article
Arya CKumar, Yadav S, Fine J, Casanal A, Chopra G, Ramanathan G, Vinothkumar KR, Subramanian R.  2020.  A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.. Angew Chem Int Ed Engl. 59(39):16961-16966. DOI:10.1002/anie.202005332.
Ramakrishna S, Jhaveri V, Konings SC, Nawalpuri B, Chakraborty S, Holst B, Schmid B, Gouras GK, Freude KK, Muddashetty RS.  2021.  APOE4 Affects Basal and NMDAR-Mediated Protein Synthesis in Neurons by Perturbing Calcium Homeostasis.. J Neurosci. 41(42):8686-8709. DOI:10.1523/JNEUROSCI.0435-21.2021.
Chandrasekaran A, Dittlau KStoklund, Corsi GI, Haukedal H, Doncheva NT, Ramakrishna S, Ambardar S, Salcedo C, Schmidt SI, Zhang Y, Cirera S, Pihl M, Schmid B, Nielsen TTolstrup, Nielsen JE, Kolko M, Kobolák J, Dinnyés A, Hyttel P, Palakodeti D et al..  2021.  Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3.. Stem Cell Reports. 16(11):2736-2751. DOI:10.1016/j.stemcr.2021.09.013.
Bairy S, Gopalan LNarayanan, Setty TGangi, Srinivasachari S, Manjunath L, Kumar JPrakash, Guntupalli SR, Bose S, Nayak V, Ghosh S, Sathyanarayanan N, Caing-Carlsson R, Wahlgren WYuan, Friemann R, Ramaswamy S, Neerathilingam M.  2018.  Automation aided optimization of cloning, expression and purification of enzymes of the bacterial sialic acid catabolic and sialylation pathways enzymes for structural studies.. Microb Biotechnol. 11(2):420-428. DOI:10.1111/1751-7915.13041.
Ghosh S, Yu C-L, Ferraro DJ, Sudha S, Pal SKumar, Schaefer WF, Gibson DT, Ramaswamy S.  2016.  Blue protein with red fluorescence.. Proc Natl Acad Sci U S A. 113(41):11513-11518. DOI:10.1073/pnas.1525622113.
Fernandes G, Mishra PK, Nawaz MSarfaraz, Donlin-Asp PG, Rahman MMostafizur, Hazra A, Kedia S, Kayenaat A, Songara D, Wyllie DJA, Schuman EM, Kind PC, Chattarji S.  2021.  Correction of amygdalar dysfunction in a rat model of fragile X syndrome.. Cell Rep. 37(2):109805. DOI:10.1016/j.celrep.2021.109805.
Caing-Carlsson R, Goyal P, Sharma A, Ghosh S, Setty TGangi, North RA, Friemann R, Ramaswamy S.  2017.  Crystal structure of N-acetylmannosamine kinase from Fusobacterium nucleatum.. Acta Crystallogr F Struct Biol Commun. 73(Pt 6):356-362. DOI:10.1107/S2053230X17007439.
Frederiksen HR, Holst B, Ramakrishna S, Muddashetty R, Schmid B, Freude K.  2019.  Generation of two iPSC lines with either a heterozygous V717I or a heterozygous KM670/671NL mutation in the APP gene.. Stem Cell Res. 34:101368. DOI:10.1016/j.scr.2018.101368.
Frederiksen HR, Holst B, Ramakrishna S, Muddashetty R, Schmid B, Freude K.  2019.  Generation of two iPSC lines with either a heterozygous V717I or a heterozygous KM670/671NL mutation in the APP gene.. Stem Cell Res. 34:101368. DOI:10.1016/j.scr.2018.101368.
Dhar MS, Marwal R, Vs R, Ponnusamy K, Jolly B, Bhoyar RC, Sardana V, Naushin S, Rophina M, Mellan TA, Mishra S, Whittaker C, Fatihi S, Datta M, Singh P, Sharma U, Ujjainiya R, Bhatheja N, Divakar MKumar, Singh MK et al..  2021.  Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India.. Science. :eabj9932. DOI:10.1126/science.abj9932.
Dhar MS, Marwal R, Vs R, Ponnusamy K, Jolly B, Bhoyar RC, Sardana V, Naushin S, Rophina M, Mellan TA, Mishra S, Whittaker C, Fatihi S, Datta M, Singh P, Sharma U, Ujjainiya R, Bhatheja N, Divakar MKumar, Singh MK et al..  2021.  Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India.. Science. :eabj9932. DOI:10.1126/science.abj9932.
Dhar MS, Marwal R, Vs R, Ponnusamy K, Jolly B, Bhoyar RC, Sardana V, Naushin S, Rophina M, Mellan TA, Mishra S, Whittaker C, Fatihi S, Datta M, Singh P, Sharma U, Ujjainiya R, Bhatheja N, Divakar MKumar, Singh MK et al..  2021.  Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India.. Science. :eabj9932. DOI:10.1126/science.abj9932.
C Fries A, Lawson SD, Wang LC, Slaughter KV, Vemula PK, Dhayani A, Joshi N, Karp JM, Rickard RF, Gorantla VS, Davis MR.  2019.  Graft-implanted, enzyme responsive, tacrolimus-eluting hydrogel enables long-term survival of orthotopic porcine limb vascularized composite allografts: A proof of concept study.. PLoS One. 14(1):e0210914. DOI:10.1371/journal.pone.0210914.
Plapp BV, Savarimuthu BRaj, Ferraro DJ, Rubach JK, Brown EN, Ramaswamy S.  2017.  Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis.. Biochemistry. 56(28):3632-3646. DOI:10.1021/acs.biochem.7b00446.
North RA, Horne CR, Davies JS, Remus DM, Muscroft-Taylor AC, Goyal P, Wahlgren WYuan, Ramaswamy S, Friemann R, Dobson RCJ.  2018.  "Just a spoonful of sugar...": import of sialic acid across bacterial cell membranes.. Biophys Rev. 10(2):219-227. DOI:10.1007/s12551-017-0343-x.
Ferraro DJ, Okerlund A, Brown E, Ramaswamy S..  2017.  {One enzyme, many reactions: structural basis for the various reactions catalyzed by naphthalene 1,2-dioxygenase}. IUCrJ. 4:648–656. DOI:10.1107/S2052252517008223.
Domnauer M, Zheng F, Li L, Zhang Y, Chang CE, Unruh JR, Conkright-Fincham J, McCroskey S, Florens L, Zhang Y, Seidel C, Fong B, Schilling B, Sharma R, Ramanathan A, Si K, Zhou C.  2021.  Proteome plasticity in response to persistent environmental change.. Mol Cell. 81(16):3294-3309.e12. DOI:10.1016/j.molcel.2021.06.028.
Domnauer M, Zheng F, Li L, Zhang Y, Chang CE, Unruh JR, Conkright-Fincham J, McCroskey S, Florens L, Zhang Y, Seidel C, Fong B, Schilling B, Sharma R, Ramanathan A, Si K, Zhou C.  2021.  Proteome plasticity in response to persistent environmental change.. Mol Cell. 81(16):3294-3309.e12. DOI:10.1016/j.molcel.2021.06.028.
Bruhn C, Ajazi A, Ferrari E, Lanz MCharles, Batrin R, Choudhary R, Walvekar A, Laxman S, Longhese MPia, Fabre E, Smolka MBustamente, Foiani M.  2020.  The Rad53-Spt21 and Tel1 axes couple glucose tolerance to histone dosage and subtelomeric silencing.. Nat Commun. 11(1):4154. DOI:10.1038/s41467-020-17961-4.
Bruhn C, Ajazi A, Ferrari E, Lanz MCharles, Batrin R, Choudhary R, Walvekar A, Laxman S, Longhese MPia, Fabre E, Smolka MBustamente, Foiani M.  2020.  The Rad53-Spt21 and Tel1 axes couple glucose tolerance to histone dosage and subtelomeric silencing.. Nat Commun. 11(1):4154. DOI:10.1038/s41467-020-17961-4.
Bruhn C, Ajazi A, Ferrari E, Lanz MCharles, Batrin R, Choudhary R, Walvekar A, Laxman S, Longhese MPia, Fabre E, Smolka MBustamente, Foiani M.  2020.  The Rad53-Spt21 and Tel1 axes couple glucose tolerance to histone dosage and subtelomeric silencing.. Nat Commun. 11(1):4154. DOI:10.1038/s41467-020-17961-4.
Mlcochova P, Kemp SA, Dhar MShanker, Papa G, Meng B, Ferreira IATM, Datir R, Collier DA, Albecka A, Singh S, Pandey R, Brown J, Zhou J, Goonawardane N, Mishra S, Whittaker C, Mellan T, Marwal R, Datta M, Sengupta S et al..  2021.  SARS-CoV-2 B.1.617.2 Delta variant replication and immune evasion.. Nature. 599(7883):114-119. DOI:10.1038/s41586-021-03944-y.
Mlcochova P, Kemp SA, Dhar MShanker, Papa G, Meng B, Ferreira IATM, Datir R, Collier DA, Albecka A, Singh S, Pandey R, Brown J, Zhou J, Goonawardane N, Mishra S, Whittaker C, Mellan T, Marwal R, Datta M, Sengupta S et al..  2021.  SARS-CoV-2 B.1.617.2 Delta variant replication and immune evasion.. Nature. 599(7883):114-119. DOI:10.1038/s41586-021-03944-y.
North RA, Wahlgren WY, Remus DM, Scalise M, Kessans SA, Dunevall E, Claesson E, da Costa TPSoares, Perugini MA, Ramaswamy S, Allison JR, Indiveri C, Friemann R, Dobson RCJ.  2018.  The Sodium Sialic Acid Symporter From Has Altered Substrate Specificity.. Front Chem. 6:233. DOI:10.3389/fchem.2018.00233.
Yasmin F, Colangeli R, Morena M, Filipski S, van der Stelt M, Pittman QJ, Hillard CJ, G Teskey C, McEwen BS, Hill MN, Chattarji S.  2020.  Stress-induced modulation of endocannabinoid signaling leads to delayed strengthening of synaptic connectivity in the amygdala.. Proc Natl Acad Sci U S A. 117(1):650-655. DOI:10.1073/pnas.1910322116.
Wahlgren WY, Dunevall E, North RA, Paz, iv A, Scalise M, Bisignano P, Bengtsson-Palme J, Goyal P, Claesson E, Caing-Carlsson R, Andersson R, Beis K, Nilsson UJ, Farewell A, Pochini L, Indiveri C, Grabe M, Dobson RCJ, Abramson J, Ramaswamy S et al..  2018.  Substrate-bound outward-open structure of a Na-coupled sialic acid symporter reveals a new Na site.. Nat Commun. 9(1):1753. DOI:10.1038/s41467-018-04045-7.
Wahlgren WY, Dunevall E, North RA, Paz, iv A, Scalise M, Bisignano P, Bengtsson-Palme J, Goyal P, Claesson E, Caing-Carlsson R, Andersson R, Beis K, Nilsson UJ, Farewell A, Pochini L, Indiveri C, Grabe M, Dobson RCJ, Abramson J, Ramaswamy S et al..  2018.  Substrate-bound outward-open structure of a Na-coupled sialic acid symporter reveals a new Na site.. Nat Commun. 9(1):1753. DOI:10.1038/s41467-018-04045-7.