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Journal Article
Haroon MMohamed, Vemula PKumar, Palakodeti D.  2022.  Flow Cytometry Analysis of Planarian Stem Cells Using DNA and Mitochondrial Dyes.. Bio Protoc. 12(2):e4299. DOI:10.21769/BioProtoc.4299.
Schmid B, Prehn KR, Nimsanor N, Garcia BIrene Alda, Poulsen U, Jørring I, Rasmussen MA, Clausen C, Mau-Holzmann UA, Ramakrishna S, Muddashetty R, Steeg R, Bruce K, Mackintosh P, Ebneth A, Holst B, Cabrera-Socorro A.  2019.  Generation of a set of isogenic, gene-edited iPSC lines homozygous for all main APOE variants and an APOE knock-out line.. Stem Cell Res. 34:101349. DOI:10.1016/j.scr.2018.11.010.
Frederiksen HR, Holst B, Ramakrishna S, Muddashetty R, Schmid B, Freude K.  2019.  Generation of two iPSC lines with either a heterozygous V717I or a heterozygous KM670/671NL mutation in the APP gene.. Stem Cell Res. 34:101368. DOI:10.1016/j.scr.2018.101368.
Saha P, San Yeoh B, Singh R, Chandrasekar B, Vemula PKumar, Haribabu B, Vijay-Kumar M, Jala VR.  2016.  Gut Microbiota Conversion of Dietary Ellagic Acid into Bioactive Phytoceutical Urolithin A Inhibits Heme Peroxidases.. PLoS One. 11(6):e0156811. DOI:10.1371/journal.pone.0156811.
Chakraborty M, Ramaiah A, Adolfi A, Halas P, Kaduskar B, Ngo LThanh, Jayaprasad S, Paul K, Whadgar S, Srinivasan S, Subramani S, Bier E, James AA, Emerson JJ.  2021.  Hidden genomic features of an invasive malaria vector, Anopheles stephensi, revealed by a chromosome-level genome assembly.. BMC Biol. 19(1):28. DOI:10.1186/s12915-021-00963-z.
Rumman M, Majumder A, Harkness L, Venugopal B, Vinay MB, Pillai MS, Kassem M, Dhawan J.  2018.  Induction of quiescence (G0) in bone marrow stromal stem cells enhances their stem cell characteristics.. Stem Cell Res. 30:69-80. DOI:10.1016/j.scr.2018.05.010.
Kotla NG, Singh R, Baby BV, Rasala S, Rasool J, Hynes SO, Martin D, Egan LJ, Vemula PK, Jala VR, Rochev Y, Pandit A.  2022.  Inflammation-specific targeted carriers for local drug delivery to inflammatory bowel disease.. Biomaterials. 281:121364. DOI:10.1016/j.biomaterials.2022.121364.
Bhatt T, Dey R, Hegde A, Ketkar AAshok, Pulianmackal AJ, Deb AP, Rampalli S, Jamora C.  2022.  Initiation of wound healing is regulated by the convergence of mechanical and epigenetic cues.. PLoS Biol. 20(9):e3001777. DOI:10.1371/journal.pbio.3001777.
Badarinath K, Dutta A, Hegde A, Pincha N, Gund R, Jamora C.  2019.  Interactions Between Epidermal Keratinocytes, Dendritic Epidermal T-Cells, and Hair Follicle Stem Cells.. Methods Mol Biol. 1879:285-297. DOI:10.1007/7651_2018_155.
James OG, Selvaraj BT, Magnani D, Burr K, Connick P, Barton SK, Vasistha NA, Hampton DW, Story D, Smigiel R, Ploski R, Brophy PJ, Ffrench-Constant C, Lyons DA, Chandran S.  2021.  iPSC-derived myelinoids to study myelin biology of humans.. Dev Cell. 56(9):1346-1358.e6. DOI:10.1016/j.devcel.2021.04.006.
North RA, Horne CR, Davies JS, Remus DM, Muscroft-Taylor AC, Goyal P, Wahlgren WYuan, Ramaswamy S, Friemann R, Dobson RCJ.  2018.  "Just a spoonful of sugar...": import of sialic acid across bacterial cell membranes.. Biophys Rev. 10(2):219-227. DOI:10.1007/s12551-017-0343-x.
Sellathurai J, Nielsen J, Hejbøl EKildall, Jørgensen LHelskov, Dhawan J, Nielsen MFriberg Br, Schrøder HDaa.  2016.  Low Oxygen Tension Enhances Expression of Myogenic Genes When Human Myoblasts Are Activated from G0 Arrest.. PLoS One. 11(7):e0158860. DOI:10.1371/journal.pone.0158860.
Jijumon AS, Bodakuntla S, Genova M, Bangera M, Sackett V, Besse L, Maksut F, Henriot V, Magiera MM, Sirajuddin M, Janke C.  2022.  Lysate-based pipeline to characterize microtubule-associated proteins uncovers unique microtubule behaviours.. Nat Cell Biol. 24(2):253-267. DOI:10.1038/s41556-021-00825-4.
Gupte TM, Haque F, Gangadharan B, Sunitha MS, Mukherjee S, Anandhan S, Rani DSelvi, Mukundan N, Jambekar A, Thangaraj K, Sowdhamini R, Sommese RF, Nag S, Spudich JA, Mercer JA.  2015.  Mechanistic heterogeneity in contractile properties of α-tropomyosin (TPM1) mutants associated with inherited cardiomyopathies.. J Biol Chem. 290(11):7003-15. DOI:10.1074/jbc.M114.596676.
Ghosh S, Singh R, Vanwinkle ZMatthew, Guo H, Vemula PKumar, Goel A, Haribabu B, Jala VRao.  2022.  Microbial metabolite restricts 5-fluorouracil-resistant colonic tumor progression by sensitizing drug transporters via regulation of FOXO3-FOXM1 axis.. Theranostics. 12(12):5574-5595. DOI:10.7150/thno.70754.
Singh R, Chandrashekharappa S, Vemula PKumar, Haribabu B, Jala VRao.  2020.  Microbial Metabolite Urolithin B Inhibits Recombinant Human Monoamine Oxidase A Enzyme.. Metabolites. 10(6) DOI:10.3390/metabo10060258.
Rana I, Kataria S, Tan TLin, Hajam EYousaf, Kashyap DKumar, Saha D, Ajnabi J, Paul S, Jayappa S, Ananthan ASHP, Kumar P, Zaarour RF, Haarshaadri J, Kansagara G, Rizvi A, Zirmire RK, Badarinath K, Khedkar SUday, Chandra Y, Samuel R et al..  2023.  Mindin (SPON2) Is Essential for Cutaneous Fibrogenesis in a Mouse Model of Systemic Sclerosis.. J Invest Dermatol. 143(5):699-710.e10. DOI:10.1016/j.jid.2022.10.011.
Rana I, Kataria S, Tan TLin, Hajam EYousaf, Kashyap DKumar, Saha D, Ajnabi J, Paul S, Jayappa S, Ananthan ASHP, Kumar P, Zaarour RF, Haarshaadri J, Kansagara G, Rizvi A, Zirmire RK, Badarinath K, Khedkar SUday, Chandra Y, Samuel R et al..  2023.  Mindin (SPON2) Is Essential for Cutaneous Fibrogenesis in a Mouse Model of Systemic Sclerosis.. J Invest Dermatol. 143(5):699-710.e10. DOI:10.1016/j.jid.2022.10.011.
Rana I, Kataria S, Tan TLin, Hajam EYousaf, Kashyap DKumar, Saha D, Ajnabi J, Paul S, Jayappa S, Ananthan ASHP, Kumar P, Zaarour RF, Haarshaadri J, Kansagara G, Rizvi A, Zirmire RK, Badarinath K, Khedkar SUday, Chandra Y, Samuel R et al..  2023.  Mindin (SPON2) Is Essential for Cutaneous Fibrogenesis in a Mouse Model of Systemic Sclerosis.. J Invest Dermatol. 143(5):699-710.e10. DOI:10.1016/j.jid.2022.10.011.
Mehta AR, Gregory JM, Dando O, Carter RN, Burr K, Nanda J, Story D, McDade K, Smith C, Morton NM, Mahad DJ, Hardingham GE, Chandran S, Selvaraj BT.  2021.  Mitochondrial bioenergetic deficits in C9orf72 amyotrophic lateral sclerosis motor neurons cause dysfunctional axonal homeostasis.. Acta Neuropathol. 141(2):257-279. DOI:10.1007/s00401-020-02252-5.
Haroon MMohamed, Lakshmanan V, Sarkar SR, Lei K, Vemula PKumar, Palakodeti D.  2021.  Mitochondrial state determines functionally divergent stem cell population in planaria.. Stem Cell Reports. 16(5):1302-1316. DOI:10.1016/j.stemcr.2021.03.022.
Jos S, Gogoi H, Prasad TKootteri, Hurakadli MA, Kamariah N, Padmanabhan B, Padavattan S.  2021.  Molecular insights into α-synuclein interaction with individual human core histones, linker histone, and dsDNA.. Protein Sci. 30(10):2121-2131. DOI:10.1002/pro.4167.
Gangadharan B, Sunitha MS, Mukherjee S, Chowdhury RRoy, Haque F, Sekar N, Sowdhamini R, Spudich JA, Mercer JA.  2017.  Molecular mechanisms and structural features of cardiomyopathy-causing troponin T mutants in the tropomyosin overlap region.. Proc Natl Acad Sci U S A. 114(42):11115-11120. DOI:10.1073/pnas.1710354114.
Roy N, Sundar S, Pillai M, Patell-Socha F, Ganesh S, Aloysius A, Rumman M, Gala H, Hughes SM, Zammit PS, Dhawan J.  2021.  mRNP granule proteins Fmrp and Dcp1a differentially regulate mRNP complexes to contribute to control of muscle stem cell quiescence and activation.. Skelet Muscle. 11(1):18. DOI:10.1186/s13395-021-00270-9.
Menon ND, Kumar MS, Babu TGSatheesh, Bose S, Vijayakumar G, Baswe M, Chatterjee M, D'Silva JRowena, Shetty K, Haripriyan J, Kumar A, Nair S, Somanath P, Nair BG, Nizet V, Kumar GB.  2021.  A Novel N4-Like Bacteriophage Isolated from a Wastewater Source in South India with Activity against Several Multidrug-Resistant Clinical Pseudomonas aeruginosa Isolates.. mSphere. 6(1) DOI:10.1128/mSphere.01215-20.
Venugopala KN, Al-Attraqchi OHA, Tratrat C, Nayak SK, Morsy MA, Aldhubiab BE, Attimarad M, Nair AB, Sreeharsha N, Venugopala R, Haroun M, Girish MB, Chandrashekharappa S, Alwassil OI, Odhav B.  2019.  Novel Series of Methyl 3-(Substituted Benzoyl)-7-Substituted-2-Phenylindolizine-1-Carboxylates as Promising Anti-Inflammatory Agents: Molecular Modeling Studies.. Biomolecules. 9(11) DOI:10.3390/biom9110661.
Pincha N, Hajam EYousaf, Badarinath K, Batta SPrakash Ra, Masudi T, Dey R, Andreasen P, Kawakami T, Samuel R, George R, Danda D, Jacob PMazhuvanch, Jamora C.  2018.  PAI1 mediates fibroblast-mast cell interactions in skin fibrosis.. J Clin Invest. 128(5):1807-1819. DOI:10.1172/JCI99088.
Mukherjee D, Paul D, Sarker S, Hasan MNur, Ghosh R, Prasad SEaswara, Vemula PK, Das R, Adhikary A, Pal SKumar, Rakshit T.  2021.  Polyethylene Glycol-Mediated Fusion of Extracellular Vesicles with Cationic Liposomes for the Design of Hybrid Delivery Systems.. ACS Appl Bio Mater. 4(12):8259-8266. DOI:10.1021/acsabm.1c00804.
Thorat K, Pandey S, Chandrashekharappa S, Vavilthota N, Hiwale AA, Shah P, Sreekumar S, Upadhyay S, Phuntsok T, Mahato M, Mudnakudu-Nagaraju KK, Sunnapu O, Vemula PK.  2018.  Prevention of pesticide-induced neuronal dysfunction and mortality with nucleophilic poly-Oxime topical gel.. Sci Adv. 4(10):eaau1780. DOI:10.1126/sciadv.aau1780.
Sreeraj VS, Holla B, Ithal D, Nadella RKumar, Mahadevan J, Balachander S, Ali F, Sheth S, Narayanaswamy JC, Venkatasubramanian G, John JP, Varghese M, Benegal V, Jain S, Reddy YJanardhan, Viswanath B.  2021.  Psychiatric symptoms and syndromes transcending diagnostic boundaries in Indian multiplex families: The cohort of ADBS study.. Psychiatry Res. 296:113647. DOI:10.1016/j.psychres.2020.113647.

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