2015
Natarajan N, Ramakrishnan P, Lakshmanan V, Palakodeti D, Rangiah K.
2015. A quantitative metabolomics peek into planarian regeneration.. Analyst. 140(10):3445-64. DOI:10.1039/c4an02037e.
2016
Lakshmanan V, Bansal D, Kulkarni J, Poduval D, Krishna S, Sasidharan V, Anand P, Seshasayee A, Palakodeti D.
2016. Genome-Wide Analysis of Polyadenylation Events in Schmidtea mediterranea.. G3 (Bethesda). 6(10):3035-3048. DOI:10.1534/g3.116.031120.
2017
Bansal D, Kulkarni J, Nadahalli K, Lakshmanan V, Krishna S, Sasidharan V, Geo J, Dilipkumar S, Pasricha R, Gulyani A, Raghavan S, Palakodeti D.
2017. Cytoplasmic poly (A)-binding protein critically regulates epidermal maintenance and turnover in the planarian .. Development. 144(17):3066-3079. DOI:10.1242/dev.152942.
Shettigar N, Joshi A, Dalmeida R, Gopalkrishna R, Chakravarthy A, Patnaik S, Mathew M, Palakodeti D, Gulyani A.
2017. Hierarchies in light sensing and dynamic interactions between ocular and extraocular sensory networks in a flatworm.. Sci Adv. 3(7):e1603025. DOI:10.1126/sciadv.1603025.
Sasidharan V, Marepally S, Elliott SA, Baid S, Lakshmanan V, Nayyar N, Bansal D, Alvarado ASánchez, Vemula PKumar, Palakodeti D.
2017. The miR-124 family of microRNAs is crucial for regeneration of the brain and visual system in the planarian Schmidtea mediterranea. Development. 144:3211–3223. DOI:10.1242/dev.144758.
2018
D'Souza MNinochka, Gowda NKumar Chan, Tiwari V, Babu ROttakandat, Anand P, Dastidar SGhosh, Singh R, James OG, Selvaraj B, Pal R, Ramesh A, Chattarji S, Chandran S, Gulyani A, Palakodeti D, Muddashetty RS.
2018. FMRP Interacts with C/D Box snoRNA in the Nucleus and Regulates Ribosomal RNA Methylation.. iScience. 9:399-411. DOI:10.1016/j.isci.2018.11.007.
Subramanian SPeruvemba, Babu P, Palakodeti D, Subramanian R.
2018. Identification of multiple isomeric core chitobiose-modified high-mannose and paucimannose -glycans in the planarian .. J Biol Chem. 293(18):6707-6720. DOI:10.1074/jbc.RA117.000782.
Rangiah K, Palakodeti D.
2018. Quantification of Neurotransmitters from Intact and Regenerating Planarians Using UHPLC-MS/SRM Method.. Methods Mol Biol. 1774:555-570. DOI:10.1007/978-1-4939-7802-1_25.
2019
Krishna S, Yim DGr, Lakshmanan V, Tirumalai V, Koh JLy, Park JEun, Cheong JKong, Low JLeng, Lim MJs, Sze SKwan, Shivaprasad P, Gulyani A, Raghavan S, Palakodeti D, DasGupta R.
2019. Dynamic expression of tRNA-derived small RNAs define cellular states.. EMBO Rep. 20(7):e47789. DOI:10.15252/embr.201947789.
Rao RArasala, Ketkar AAshok, Kedia N, Krishnamoorthy VK, Lakshmanan V, Kumar P, Mohanty A, Kumar SDilip, Raja SO, Gulyani A, Chaturvedi CPrakash, Brand M, Palakodeti D, Rampalli S.
2019. KMT1 family methyltransferases regulate heterochromatin-nuclear periphery tethering via histone and non-histone protein methylation.. EMBO Rep. DOI:10.15252/embr.201643260.
Krishna S, Palakodeti D, Solana J.
2019. Post-transcriptional regulation in planarian stem cells.. Semin Cell Dev Biol. 87:69-78. DOI:10.1016/j.semcdb.2018.05.013.
Sarkar A, Mukundan N, Sowndarya S, Dubey VKumar, Babu R, Lakshmanan V, Rangiah K, Panicker MM, Palakodeti D, Subramanian SPeruvemba, Ramaswamy S.
2019. Serotonin is essential for eye regeneration in planaria Schmidtea mediterranea.. FEBS Lett. DOI:10.1002/1873-3468.13607.
Ganesan S, Palani HKumar, Lakshmanan V, Balasundaram N, Alex AAbu, David S, Venkatraman A, Korula A, George B, Balasubramanian P, Palakodeti D, Vyas N, Mathews V.
2019. Stromal cells downregulate miR-23a-5p to activate protective autophagy in acute myeloid leukemia.. Cell Death Dis. 10(10):736. DOI:10.1038/s41419-019-1964-8.
2020
2021
Chandrasekaran A, Dittlau KStoklund, Corsi GI, Haukedal H, Doncheva NT, Ramakrishna S, Ambardar S, Salcedo C, Schmidt SI, Zhang Y, Cirera S, Pihl M, Schmid B, Nielsen TTolstrup, Nielsen JE, Kolko M, Kobolák J, Dinnyés A, Hyttel P, Palakodeti D et al..
2021. Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3.. Stem Cell Reports. 16(11):2736-2751. DOI:10.1016/j.stemcr.2021.09.013.
Lakshmanan V, N ST, Bansal D, Padubidri SV, Palakodeti D, Krishna S.
2021. Comprehensive annotation and characterization of planarian tRNA and tRNA-derived fragments (tRFs).. RNA. DOI:10.1261/rna.077701.120.
Shettigar N, Chakravarthy A, Umashankar S, Lakshmanan V, Palakodeti D, Gulyani A.
2021. Discovery of a body-wide photosensory array that matures in an adult-like animal and mediates eye-brain-independent movement and arousal.. Proc Natl Acad Sci U S A. 118(20) DOI:10.1073/pnas.2021426118.
Chakravarthy A, Nandakumar A, George G, Ranganathan S, Umashankar S, Shettigar N, Palakodeti D, Gulyani A, Ramesh A.
2021. Engineered RNA biosensors enable ultrasensitive SARS-CoV-2 detection in a simple color and luminescence assay.. Life Sci Alliance. 4(12) DOI:10.26508/lsa.202101213.
Dhar MS, Marwal R, Vs R, Ponnusamy K, Jolly B, Bhoyar RC, Sardana V, Naushin S, Rophina M, Mellan TA, Mishra S, Whittaker C, Fatihi S, Datta M, Singh P, Sharma U, Ujjainiya R, Bhatheja N, Divakar MKumar, Singh MK et al..
2021. Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India.. Science. :eabj9932. DOI:10.1126/science.abj9932.
Subramanian SPeruvemba, Lakshmanan V, Palakodeti D, Subramanian R.
2021. Glycomic and glycotranscriptomic profiling of mucin-type O-glycans in planarian Schmidtea mediterranea.. Glycobiology. DOI:10.1093/glycob/cwab097.
Biswas R, Banerjee A, Lembo S, Zhao Z, Lakshmanan V, Lim R, Le S, Nakasaki M, Kutyavin V, Wright G, Palakodeti D, Ross RS, Jamora C, Vasioukhin V, Jie Y, Raghavan S.
2021. Mechanical instability of adherens junctions overrides intrinsic quiescence of hair follicle stem cells.. Dev Cell. 56(6):761-780.e7. DOI:10.1016/j.devcel.2021.02.020.
Haroon MMohamed, Lakshmanan V, Sarkar SR, Lei K, Vemula PKumar, Palakodeti D.
2021. Mitochondrial state determines functionally divergent stem cell population in planaria.. Stem Cell Reports. 16(5):1302-1316. DOI:10.1016/j.stemcr.2021.03.022.
Nikhat S, Yadavalli AD, Prusty A, Narayan PK, Palakodeti D, Murre C, Pongubala JMR.
2021. A regulatory network of microRNAs confers lineage commitment during early developmental trajectories of B and T lymphocytes.. Proc Natl Acad Sci U S A. 118(46) DOI:10.1073/pnas.2104297118.
Jain PKumar, Jayappa S, Sairam T, Mittal A, Paul S, Rao VJ, Chittora H, Kashyap DK, Palakodeti D, Thangaraj K, Shenthar J, Koranchery R, Rajendran R, Alireza H, Mohanan KSreedharan, Rathinavel A, Dhandapany PS.
2021. Ribosomal protein S6 kinase beta-1 gene variants cause hypertrophic cardiomyopathy.. J Med Genet. DOI:10.1136/jmedgenet-2021-107866.
2022
Sarkar SR, Dubey VKumar, Jahagirdar A, Lakshmanan V, Haroon MMohamed, Sowndarya S, Sowdhamini R, Palakodeti D.
2022. DDX24 is required for muscle fiber organization and the suppression of wound-induced Wnt activity necessary for pole re-establishment during planarian regeneration.. Dev Biol. 488:11-29. DOI:10.1016/j.ydbio.2022.04.011.
Haroon MMohamed, Vemula PKumar, Palakodeti D.
2022. Flow Cytometry Analysis of Planarian Stem Cells Using DNA and Mitochondrial Dyes.. Bio Protoc. 12(2):e4299. DOI:10.21769/BioProtoc.4299.
D'Souza MNinochka, Ramakrishna S, Radhakrishna BK, Jhaveri V, Ravindran S, Yeramala L, Nair D, Palakodeti D, Muddashetty RS.
2022. Function of FMRP Domains in Regulating Distinct Roles of Neuronal Protein Synthesis.. Mol Neurobiol. 59(12):7370-7392. DOI:10.1007/s12035-022-03049-1.
Dubey VKumar, Sarkar SR, Lakshmanan V, Dalmeida R, Gulyani A, Palakodeti D.
2022. S. mediterranea ETS-1 regulates the function of cathepsin-positive cells and the epidermal lineage landscape via basement membrane remodeling.. J Cell Sci. 135(20) DOI:10.1242/jcs.259900.
Hariharan N, Ghosh S, Palakodeti D.
2022. The story of rRNA expansion segments: Finding functionality amidst diversity.. Wiley Interdiscip Rev RNA. :e1732. DOI:10.1002/wrna.1732.
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