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Journal Article
Lakshmanan V, N ST, Bansal D, Padubidri SV, Palakodeti D, Krishna S.  2021.  Comprehensive annotation and characterization of planarian tRNA and tRNA-derived fragments (tRFs).. RNA. DOI:10.1261/rna.077701.120.
Bansal D, Kulkarni J, Nadahalli K, Lakshmanan V, Krishna S, Sasidharan V, Geo J, Dilipkumar S, Pasricha R, Gulyani A, Raghavan S, Palakodeti D.  2017.  Cytoplasmic poly (A)-binding protein critically regulates epidermal maintenance and turnover in the planarian .. Development. 144(17):3066-3079. DOI:10.1242/dev.152942.
Shettigar N, Chakravarthy A, Umashankar S, Lakshmanan V, Palakodeti D, Gulyani A.  2021.  Discovery of a body-wide photosensory array that matures in an adult-like animal and mediates eye-brain-independent movement and arousal.. Proc Natl Acad Sci U S A. 118(20) DOI:10.1073/pnas.2021426118.
Krishna S, Yim DGr, Lakshmanan V, Tirumalai V, Koh JLy, Park JEun, Cheong JKong, Low JLeng, Lim MJs, Sze SKwan, Shivaprasad P, Gulyani A, Raghavan S, Palakodeti D, DasGupta R.  2019.  Dynamic expression of tRNA-derived small RNAs define cellular states.. EMBO Rep. 20(7):e47789. DOI:10.15252/embr.201947789.
Chakravarthy A, Nandakumar A, George G, Ranganathan S, Umashankar S, Shettigar N, Palakodeti D, Gulyani A, Ramesh A.  2021.  Engineered RNA biosensors enable ultrasensitive SARS-CoV-2 detection in a simple color and luminescence assay.. Life Sci Alliance. 4(12) DOI:10.26508/lsa.202101213.
D'Souza MNinochka, Gowda NKumar Chan, Tiwari V, Babu ROttakandat, Anand P, Dastidar SGhosh, Singh R, James OG, Selvaraj B, Pal R, Ramesh A, Chattarji S, Chandran S, Gulyani A, Palakodeti D, Muddashetty RS.  2018.  FMRP Interacts with C/D Box snoRNA in the Nucleus and Regulates Ribosomal RNA Methylation.. iScience. 9:399-411. DOI:10.1016/j.isci.2018.11.007.
Lakshmanan V, Bansal D, Kulkarni J, Poduval D, Krishna S, Sasidharan V, Anand P, Seshasayee A, Palakodeti D.  2016.  Genome-Wide Analysis of Polyadenylation Events in Schmidtea mediterranea.. G3 (Bethesda). 6(10):3035-3048. DOI:10.1534/g3.116.031120.
Dhar MS, Marwal R, Vs R, Ponnusamy K, Jolly B, Bhoyar RC, Sardana V, Naushin S, Rophina M, Mellan TA, Mishra S, Whittaker C, Fatihi S, Datta M, Singh P, Sharma U, Ujjainiya R, Bhatheja N, Divakar MKumar, Singh MK et al..  2021.  Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India.. Science. :eabj9932. DOI:10.1126/science.abj9932.
Subramanian SPeruvemba, Lakshmanan V, Palakodeti D, Subramanian R.  2021.  Glycomic and glycotranscriptomic profiling of mucin-type O-glycans in planarian Schmidtea mediterranea.. Glycobiology. DOI:10.1093/glycob/cwab097.
Shettigar N, Joshi A, Dalmeida R, Gopalkrishna R, Chakravarthy A, Patnaik S, Mathew M, Palakodeti D, Gulyani A.  2017.  Hierarchies in light sensing and dynamic interactions between ocular and extraocular sensory networks in a flatworm.. Sci Adv. 3(7):e1603025. DOI:10.1126/sciadv.1603025.
Subramanian SPeruvemba, Babu P, Palakodeti D, Subramanian R.  2018.  Identification of multiple isomeric core chitobiose-modified high-mannose and paucimannose -glycans in the planarian .. J Biol Chem. 293(18):6707-6720. DOI:10.1074/jbc.RA117.000782.
Rao RArasala, Ketkar AAshok, Kedia N, Krishnamoorthy VK, Lakshmanan V, Kumar P, Mohanty A, Kumar SDilip, Raja SO, Gulyani A, Chaturvedi CPrakash, Brand M, Palakodeti D, Rampalli S.  2019.  KMT1 family methyltransferases regulate heterochromatin-nuclear periphery tethering via histone and non-histone protein methylation.. EMBO Rep. DOI:10.15252/embr.201643260.
Biswas R, Banerjee A, Lembo S, Zhao Z, Lakshmanan V, Lim R, Le S, Nakasaki M, Kutyavin V, Wright G, Palakodeti D, Ross RS, Jamora C, Vasioukhin V, Jie Y, Raghavan S.  2021.  Mechanical instability of adherens junctions overrides intrinsic quiescence of hair follicle stem cells.. Dev Cell. 56(6):761-780.e7. DOI:10.1016/j.devcel.2021.02.020.
Sasidharan V, Marepally S, Elliott SA, Baid S, Lakshmanan V, Nayyar N, Bansal D, Alvarado ASánchez, Vemula PKumar, Palakodeti D.  2017.  The miR-124 family of microRNAs is crucial for regeneration of the brain and visual system in the planarian Schmidtea mediterranea. Development. 144:3211–3223. DOI:10.1242/dev.144758.
Haroon MMohamed, Lakshmanan V, Sarkar SR, Lei K, Vemula PKumar, Palakodeti D.  2021.  Mitochondrial state determines functionally divergent stem cell population in planaria.. Stem Cell Reports. 16(5):1302-1316. DOI:10.1016/j.stemcr.2021.03.022.
Javali A, Lakshmanan V, Palakodeti D, Sambasivan R.  2020.  Modulation of β-catenin levels regulates cranial neural crest patterning and dispersal into first pharyngeal arch.. Dev Dyn. DOI:10.1002/dvdy.208.
Krishna S, Palakodeti D, Solana J.  2019.  Post-transcriptional regulation in planarian stem cells.. Semin Cell Dev Biol. 87:69-78. DOI:10.1016/j.semcdb.2018.05.013.
Rangiah K, Palakodeti D.  2018.  Quantification of Neurotransmitters from Intact and Regenerating Planarians Using UHPLC-MS/SRM Method.. Methods Mol Biol. 1774:555-570. DOI:10.1007/978-1-4939-7802-1_25.
Natarajan N, Ramakrishnan P, Lakshmanan V, Palakodeti D, Rangiah K.  2015.  A quantitative metabolomics peek into planarian regeneration.. Analyst. 140(10):3445-64. DOI:10.1039/c4an02037e.
Sarkar A, Mukundan N, Sowndarya S, Dubey VKumar, Babu R, Lakshmanan V, Rangiah K, Panicker MM, Palakodeti D, Subramanian SPeruvemba, Ramaswamy S.  2019.  Serotonin is essential for eye regeneration in planaria Schmidtea mediterranea.. FEBS Lett. DOI:10.1002/1873-3468.13607.
Ganesan S, Palani HKumar, Lakshmanan V, Balasundaram N, Alex AAbu, David S, Venkatraman A, Korula A, George B, Balasubramanian P, Palakodeti D, Vyas N, Mathews V.  2019.  Stromal cells downregulate miR-23a-5p to activate protective autophagy in acute myeloid leukemia.. Cell Death Dis. 10(10):736. DOI:10.1038/s41419-019-1964-8.
Krishna S, Raghavan S, DasGupta R, Palakodeti D.  2021.  tRNA-derived fragments (tRFs): establishing their turf in post-transcriptional gene regulation.. Cell Mol Life Sci. DOI:10.1007/s00018-020-03720-7.